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Crystal structure and Hirshfeld surface analysis of <i>N</i> -(1 <i>H</i> -benzo[ <i>d</i> ]imidazol-2-yl)acetamide

Akmaljon TojiboevUniversity of Geological Sciences, Olimlar str. 64, Tashkent 100170, UzbekistanR. Ya. OkmanovInstitute of the Chemistry of Plant Substances, Uzbekistan Academy of Sciences, Mirzo Ulugbek Str. 77, Tashkent 100170, UzbekistanА. Ш. АбдуразаковInstitute of the Chemistry of Plant Substances, Uzbekistan Academy of Sciences, Mirzo Ulugbek Str. 77, Tashkent 100170, UzbekistanSarvar SaidovInstitute of the Chemistry of Plant Substances, Uzbekistan Academy of Sciences, Mirzo Ulugbek Str. 77, Tashkent 100170, UzbekistanElyor RakhmatovInstitute of the Chemistry of Plant Substances, Uzbekistan Academy of Sciences, Mirzo Ulugbek Str. 77, Tashkent 100170, UzbekistanAbduakhad KodirovKarshi State University, Kuchabog str. 17, Karshi 180119, UzbekistanBurkhon ElmuradovInstitute of the Chemistry of Plant Substances, Uzbekistan Academy of Sciences, Mirzo Ulugbek Str. 77, Tashkent 100170, Uzbekistan
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Abstract

The crystal structure of the title compound, C 9 H 9 N 3 O, was refined using non-spherical scattering factors. This quantum crystallographic approach provided enhanced precision for the H-atom positions and a refined description of the electron density. The asymmetric unit comprises two molecules ( Z ′ = 2) exhibiting high conformational similarity (r.m.s. deviation between the molecules is 0.083 Å). In the crystal, molecules form pseudocentrosymmetric dimers via intermolecular N—H...O and N—H...N hydrogen bonds. These units are further linked into supramolecular layers characterized by D (1), C 2 2 (8), C 2 2 (10), R 2 2 (8) and R 2 2 (12) graph-set motifs. The packing is mainly consolidated by C—H...π interactions. Hirshfeld surface analysis and two-dimensional fingerprint plots were used to quantify the supramolecular assembly, identifying H...H (45%), C...H/H...C (20.8%), N...H/H...N (12.2%) and O...H/H...O (11.5%) contacts as the primary contributors to the crystal packing.

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