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Interactomic exploration of LRRC8A in volume-regulated anion channels

Veronica CarpaneseMargherita FestaDiBio, Unipd, via Ugo Bassi 58/B, 35131, Padova, ItalyElena ProsdocimiMagdalena BachmannDaba Farber Cancer Research Institute, Boston, MA, USASoha SadeghiSara BertelliHumboldt Universität Berlin, AG Zelluläre Biophysik, Dorotheenstr, 19-21 10099, Berlin, GermanyFrank SteinProteomics Core Facility, EMBL Heidelberg, Meyerhofstraße 1, 69117, Heidelberg, GermanyAngelo VelleMostafa A. L. Abdel-SalamDiBio, Unipd, via Ugo Bassi 58/B, 35131, Padova, ItalyChiara RomualdiDiBio, Unipd, via Ugo Bassi 58/B, 35131, Padova, ItalyMichael PuschVanessa ChecchettoDiBio, Unipd, via Ugo Bassi 58/B, 35131, Padova, Italy. [email protected]
2024en
ABI

Abstract

Ion channels are critical in enabling ion movement into and within cells and are important targets for pharmacological interventions in different human diseases. In addition to their ion transport abilities, ion channels interact with signalling and scaffolding proteins, which affects their function, cellular positioning, and links to intracellular signalling pathways. The study of "channelosomes" within cells has the potential to uncover their involvement in human diseases, although this field of research is still emerging. LRRC8A is the gene that encodes a crucial protein involved in the formation of volume-regulated anion channels (VRACs). Some studies suggest that LRRC8A could be a valuable prognostic tool in different types of cancer, serving as a biomarker for predicting patients' outcomes. LRRC8A expression levels might be linked to tumour progression, metastasis, and treatment response, although its implications in different cancer types can be varied. Here, publicly accessible databases of cancer patients were systematically analysed to determine if a correlation between VRAC channel expression and survival rate exists across distinct cancer types. Moreover, we re-evaluated the impact of LRRC8A on cellular proliferation and migration in colon cancer via HCT116 LRRC8A-KO cells, which is a current topic of debate in the literature. In addition, to investigate the role of LRRC8A in cellular signalling, we conducted biotin proximity-dependent identification (BioID) analysis, revealing a correlation between VRAC channels and cell-cell junctions, mechanisms that govern cellular calcium homeostasis, kinases, and GTPase signalling. Overall, this dataset improves our understanding of LRRC8A/VRAC and explores new research avenues while identifying promising therapeutic targets and promoting inventive methods for disease treatment.

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