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Chip-based analysis of exosomal mRNA mediating drug resistance in glioblastoma

Huilin ShaoCenter for Systems Biology, Massachusetts General Hospital, 185 Cambridge St, CPZN 5206, Boston, Massachusetts 02114, USAJaehoon ChungCenter for Systems Biology, Massachusetts General Hospital, 185 Cambridge St, CPZN 5206, Boston, Massachusetts 02114, USAKyungheon LeeCenter for Systems Biology, Massachusetts General Hospital, 185 Cambridge St, CPZN 5206, Boston, Massachusetts 02114, USALeonora Balaj1] Department of Neurology, Massachusetts General Hospital, Fruit St, Boston, Massachusetts 02114, USA [2] Program in Neuroscience, Harvard Medical School, 200 Longwood Ave, Boston, Massachusetts 02115, USAChangwook MinCenter for Systems Biology, Massachusetts General Hospital, 185 Cambridge St, CPZN 5206, Boston, Massachusetts 02114, USABob S. CarterDivision of Neurological Surgery, UCSD School of Medicine, San Diego, California 92103, USAFred H. Hochberg1] Division of Neurological Surgery, UCSD School of Medicine, San Diego, California 92103, USA [2] Massachusetts General Hospital Cancer Center, Boston, Massachusetts 02114, USAXandra O. Breakefield1] Department of Neurology, Massachusetts General Hospital, Fruit St, Boston, Massachusetts 02114, USA [2] Program in Neuroscience, Harvard Medical School, 200 Longwood Ave, Boston, Massachusetts 02115, USA [3] Department of Radiology, Massachusetts General Hospital, Fruit St, Boston, Massachusetts 02114, USAHakho Lee1] Center for Systems Biology, Massachusetts General Hospital, 185 Cambridge St, CPZN 5206, Boston, Massachusetts 02114, USA [2] Department of Radiology, Massachusetts General Hospital, Fruit St, Boston, Massachusetts 02114, USARalph Weissleder1] Center for Systems Biology, Massachusetts General Hospital, 185 Cambridge St, CPZN 5206, Boston, Massachusetts 02114, USA [2] Massachusetts General Hospital Cancer Center, Boston, Massachusetts 02114, USA [3] Department of Radiology, Massachusetts General Hospital, Fruit St, Boston, Massachusetts 02114, USA [4] Department of Systems Biology, Harvard Medical School, 200 Longwood Ave, Boston, Massachusetts 02115, USA
2015en
ABI

Abstract

Real-time monitoring of drug efficacy in glioblastoma multiforme (GBM) is a major clinical problem as serial re-biopsy of primary tumours is often not a clinical option. MGMT (O(6)-methylguanine DNA methyltransferase) and APNG (alkylpurine-DNA-N-glycosylase) are key enzymes capable of repairing temozolomide-induced DNA damages and their levels in tissue are inversely related to treatment efficacy. Yet, serial clinical analysis remains difficult, and, when done, primarily relies on promoter methylation studies of tumour biopsy material at the time of initial surgery. Here we present a microfluidic chip to analyse mRNA levels of MGMT and APNG in enriched tumour exosomes obtained from blood. We show that exosomal mRNA levels of these enzymes correlate well with levels found in parental cells and that levels change considerably during treatment of seven patients. We propose that if validated on a larger cohort of patients, the method may be used to predict drug response in GBM patients.

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