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Работы, на которые ссылается эта работа

Работ: 80

Работа: New insights into the molecular phylogeny and biogeographical history of Allium subgenus Melanocrommyum (Amaryllidaceae) based on plastome and nuclear sequences

  1. MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

    Fredrik Ronquist, Maxim Teslenko, Paul van der Mark +7

    Статья2012Цитирований: 74
    ABI

  2. MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

    Kazutaka Katoh, Daron M. Standley

    Статья2013Цитирований: 70
    ABI

  3. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

    Alexandros Stamatakis

    Статья2014Цитирований: 69
    ABI

  4. Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

    Matthew D. Kearse, Richard Moir, Amy Wilson +11

    Статья2012Цитирований: 63
    ABI

  5. jModelTest 2: more models, new heuristics and parallel computing

    Diego Darriba, Guillermo L. Taboada, Ramón Doallo +1

    Другое2012Цитирований: 45
    ABI

  6. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes

    Jian‐Jun Jin, Wen-Bin Yu, Jun-Bo Yang +4

    Статья2020Цитирований: 41
    ABI

  7. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

    Salvador Capella-Gutiérrez, José M. Silla-Martínez, Toni Gabaldón

    Статья2009Цитирований: 26
    ABI

  8. Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7

    Andrew Rambaut, Alexei J. Drummond, Dong Xie +2

    Статья2018Цитирований: 18
    ABI

  9. BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

    Remco Bouckaert, Timothy G. Vaughan, Joëlle Barido‐Sottani +22

    Статья2019Цитирований: 10
    ABI

  10. Phylogeny and New Intrageneric Classification of Allium (Alliaceae) Based on Nuclear Ribosomal DNA ITS Sequences

    Nikolai Friesen, Reinhard Fritsch, Frank R. Blattner

    Статья2006Цитирований: 10
    ABI

  11. Phylogenomics of Allium section Cepa (Amaryllidaceae) provides new insights on domestication of onion

    Ziyoviddin Yusupov, Tao Deng, Sergei Volis +4

    СтатьяGarlic and Onion StudiesPlant Diversity2020Цитирований: 7
    ABI

  12. RASP (Reconstruct Ancestral State in Phylogenies): A tool for historical biogeography

    Yan Yu, AJ Harris, Christopher Blair +1

    Статья2015Цитирований: 7
    ABI

  13. Phylogeny and biogeography of Allium (Amaryllidaceae: Allieae) based on nuclear ribosomal internal transcribed spacer and chloroplast rps16 sequences, focusing on the inclusion of species endemic to China

    Qiao‐Qiao Li, Shou-Feng Zhou, Xinxin He +3

    Статья2010Цитирований: 6
    ABI

  14. Maximum Likelihood Inference of Geographic Range Evolution by Dispersal, Local Extinction, and Cladogenesis

    Richard H. Ree, Stephen A. Smith

    Статья2008Цитирований: 6
    ABI

  15. Model Selection in Historical Biogeography Reveals that Founder-Event Speciation Is a Crucial Process in Island Clades

    Nicholas J. Matzke

    Статья2014Цитирований: 6
    ABI

  16. "Complete chloroplast genomes of ten species from subgenus Allium (Allium, Amaryllidaceae) "

    Abdukhalimkhon Munavvarov, Ziyoviddin Yusupov, Ibrokhimjon Ergashov +3

    Статья2022Цитирований: 5
    ABI

  17. NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

    Ravi K. Patel, Mukesh Jain

    Статья2012Цитирований: 5
    ABI

  18. Seed macro- and micromorphology in <i>Allium</i> (Amaryllidaceae) and its phylogenetic significance

    Ziyoviddin Yusupov, Ibrokhimjon Ergashov, Sergei Volis +6

    СтатьяGarlic and Onion StudiesAnnals of Botany2022Цитирований: 4
    ABI

  19. Uplift, exhumation, and deformation in the Chinese Tian Shan

    Trevor A. Dumitru, Da Zhou, Edmund Z. Chang +4

    Глава2001Цитирований: 4
    ABI

  20. New classification of Allium L. subg. Melanocrommyum (Webb & Berthel.) Rouy (Alliaceae) based on molecular and morphological characters.

    Reinhard Fritsch, Frank R. Blattner, Maia Gurushidze

    Статья2010Цитирований: 4
    ABI

  21. Bayesian Analysis of Biogeography when the Number of Areas is Large

    Michael J. Landis, Nicholas J. Matzke, Brian R. Moore +1

    Статья2013Цитирований: 4
    ABI

  22. ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R

    Emmanuel Paradis, Klaus Schliep

    Статья2018Цитирований: 4
    ABI

  23. Phylogenetic analysis of Allium subg. Melanocrommyum infers cryptic species and demands a new sectional classification

    Maia Gurushidze, Reinhard Fritsch, Frank R. Blattner

    Статья2008Цитирований: 3
    ABI

  24. Insights into phylogeny, age and evolution of Allium (Amaryllidaceae) based on the whole plastome sequences

    Deng‐Feng Xie, Jin‐Bo Tan, Yan Yu +4

    Статья2020Цитирований: 3
    ABI

  25. Taxonomy and phylogenetics of<i>Allium</i>section<i>Decipientia</i>(Amaryllidaceae): morphological characters do not reflect the evolutionary history revealed by molecular markers

    Nikolai Friesen, С. В. Смирнов, Mathias Leweke +2

    Статья2021Цитирований: 3
    ABI