Работы, на которые ссылается эта работа

Работ: 65

Работа: The effect of cysteine oxidation on conformational changes of SARS-CoV-2 spike protein using atomistic simulations

VMD: Visual molecular dynamics
William Humphrey, Andrew Dalke, Klaus Schulten
Статья1996Цитирований: 77
ABI
GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers
M Abraham, Teemu J. Murtola, Roland Schulz +4
Статья2015Цитирований: 30
ABI
Polymorphic transitions in single crystals: A new molecular dynamics method
Michele Parrinello, A. Rahman
Статья1981Цитирований: 27
ABI
Particle mesh Ewald: An <i>N</i>⋅log(<i>N</i>) method for Ewald sums in large systems
Tom Darden, Darrin M. York, Lee G. Pedersen
Статья1993Цитирований: 16
ABI
A smooth particle mesh Ewald method
Ulrich Essmann, L. Perera, Max L. Berkowitz +3
Статья1995Цитирований: 12
ABI
Chemical modification of amino acids by atmospheric-pressure cold plasma in aqueous solution
Eisuke Takai, Tsuyoshi Kitamura, Junpei Kuwabara +6
Статья2014Цитирований: 12
ABI
The Nose–Hoover thermostat
D.J. Evans, Brad Lee Holian
Статья1985Цитирований: 11
ABI
Oxidative damage to hyaluronan–CD44 interactions as an underlying mechanism of action of oxidative stress-inducing cancer therapy
Maksudbek Yusupov, Angela Privat‐Maldonado, Rodrigo M. Cordeiro +5
СтатьяProteoglycans and glycosaminoglycans researchRedox Biology2021Цитирований: 10
ABI
Oxidation destabilizes toxic amyloid beta peptide aggregation
Jamoliddin Razzokov, Maksudbek Yusupov, Annemie Bogaerts
Статья2019Цитирований: 10
ABI
THE weighted histogram analysis method for free‐energy calculations on biomolecules. I. The method
Shankar Kumar, John M. Rosenberg, Djamal Bouzida +2
Статья1992Цитирований: 10
ABI
Impact of plasma oxidation on structural features of human epidermal growth factor
Maksudbek Yusupov, Jan‐Wilm Lackmann, Jamoliddin Razzokov +3
Статья2018Цитирований: 9
ABI
Oxidation of Innate Immune Checkpoint CD47 on Cancer Cells with Non-Thermal Plasma
Abraham Lin, Jamoliddin Razzokov, Hanne Verswyvel +7
СтатьяPlasma Applications and DiagnosticsCancers2021Цитирований: 9
ABI
Umbrella sampling
Johannes Kästner
Статья2011Цитирований: 8
ABI
A molecular dynamics method for simulations in the canonical ensemble
Shūichi Nosé
Статья1984Цитирований: 8
ABI
Canonical dynamics: Equilibrium phase-space distributions
William G. Hoover
Статья1985Цитирований: 8
ABI
Interaction of Atmospheric-Pressure Air Microplasmas with Amino Acids as Fundamental Processes in Aqueous Solution
Renwu Zhou, Rusen Zhou, Jinxing Zhuang +5
Статья2016Цитирований: 7
ABI
A familial cluster of pneumonia associated with the 2019 novel coronavirus indicating person-to-person transmission: a study of a family cluster
Jasper Fuk‐Woo Chan, Shuofeng Yuan, Kin‐Hang Kok +18
Статья2020Цитирований: 7
ABI
Hydroxyl Radical-Mediated Modification of Proteins as Probes for Structural Proteomics
Guozhong Xu, Mark R. Chance
Обзорная статья2007Цитирований: 6
ABI
CHARMM‐GUI: A web‐based graphical user interface for CHARMM
Sunhwan Jo, Taehoon Kim, Vidyashankara Iyer +1
Статья2008Цитирований: 6
ABI
The effect of reactive oxygen and nitrogen species on the structure of cytoglobin: A potential tumor suppressor
Joey De Backer, Jamoliddin Razzokov, Dietmar Hammerschmid +10
Статья2018Цитирований: 5
ABI
Transport of Reactive Oxygen and Nitrogen Species across Aquaporin: A Molecular Level Picture
Maksudbek Yusupov, Jamoliddin Razzokov, Rodrigo M. Cordeiro +1
Статья2019Цитирований: 5
ABI
Effect of oxidative stress on cystine transportation by xC‾ antiporter
Maryam Ghasemitarei, Maksudbek Yusupov, Jamoliddin Razzokov +2
Статья2019Цитирований: 5
ABI
Cryo-EM structure of the 2019-nCoV spike in the prefusion conformation
Daniel Wrapp, Nianshuang Wang, Kizzmekia S. Corbett +5
Статья2020Цитирований: 5
ABI
Implementation of the CHARMM Force Field in GROMACS: Analysis of Protein Stability Effects from Correction Maps, Virtual Interaction Sites, and Water Models
Pär Bjelkmar, Per Larsson, Michel A. Cuendet +2
Статья2010Цитирований: 4
ABI
CHARMM general force field: A force field for drug‐like molecules compatible with the CHARMM all‐atom additive biological force fields
Kenno Vanommeslaeghe, Elizabeth Hatcher, Chitrangada Acharya +8
Статья2009Цитирований: 4
ABI