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Molecular systematics of the marine Dothideomycetes

Satinee SuetrongDepartment of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, 90112, ThailandConrad L. SchochNational Center for Biothechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, MSC 6510, Bethesda, Maryland 20892-6510, U.S.AJoseph W. SpataforaDepartment of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon, 97331, U.S.AJan KohlmeyerInstitute of Marine Sciences, University of North Carolina at Chapel Hill, Morehead City, North Carolina 28557, U.S.ABrigitte Volkmann‐KohlmeyerInstitute of Marine Sciences, University of North Carolina at Chapel Hill, Morehead City, North Carolina 28557, U.S.AJariya SakayarojBioresources Technology Unit, National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, ThailandSouwalak PhongpaichitDepartment of Microbiology Faculty of Science, Prince of Songkla University Hat Yai, Songkhla 90112, ThailandKazuaki TanakaFaculty of Agriculture and Life Sciences, Hirosaki University, Bunkyo-cho 3, Hirosaki, Aomori 036-8561, JapanKazuyuki HirayamaFaculty of Agriculture and Life Sciences, Hirosaki University, Bunkyo-cho 3, Hirosaki, Aomori 036-8561, JapanE.B. Gareth JonesBioresources Technology Unit, National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand
2009en
ABI

Аннотация

Phylogenetic analyses of four nuclear genes, namely the large and small subunits of the nuclear ribosomal RNA, transcription elongation factor 1-alpha and the second largest RNA polymerase II subunit, established that the ecological group of marine bitunicate ascomycetes has representatives in the orders Capnodiales, Hysteriales, Jahnulales, Mytilinidiales, Patellariales and Pleosporales. Most of the fungi sequenced were intertidal mangrove taxa and belong to members of 12 families in the Pleosporales: Aigialaceae, Didymellaceae,Leptosphaeriaceae, Lenthitheciaceae, Lophiostomataceae, Massarinaceae,Montagnulaceae, Morosphaeriaceae, Phaeosphaeriaceae, Pleosporaceae, Testudinaceae and Trematosphaeriaceae. Two new families are described: Aigialaceae and Morosphaeriaceae, and three new genera proposed: Halomassarina, Morosphaeria and Rimora. Few marine species are reported from the Dothideomycetidae (e.g. Mycosphaerellaceae, Capnodiales), a group poorly studied at the molecular level. New marine lineages include the Testudinaceae and Manglicolaguatemalensis in the Jahnulales. Significantly, most marine Dothideomycetes are intertidal tropical species with only a few from temperate regions on salt marsh plants (Spartina species and Juncus roemerianus), and rarely totally submerged (e.g. Halotthia posidoniae and Pontoporeia biturbinata on the seagrasses Posidonia oceanica and Cymodocea nodosum). Specific attention is given to the adaptation of the Dothideomycetes to the marine milieu, new lineages of marine fungi and their host specificity.

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