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Exploring the Trans‐Cleavage Activity of CRISPR‐Cas12a (cpf1) for the Development of a Universal Electrochemical Biosensor

Yifan DaiDepartment of Chemical and Biomolecular Engineering, Electronics Design Center Case Western Reserve University Cleveland OH 44106 USARodrigo A. SomozaDepartment of Biology, Skeletal Research Center &, Center for Multimodal Evaluation of Engineered Cartilage Case Western Reserve University Cleveland OH 44106 USALiu WangDepartment of Genetics and Genome Sciences School of Medicine Case Western Reserve University Cleveland OH 44106 USAJean F. WelterDepartment of Biology, Skeletal Research Center &, Center for Multimodal Evaluation of Engineered Cartilage Case Western Reserve University Cleveland OH 44106 USAYan LiDepartment of Genetics and Genome Sciences School of Medicine Case Western Reserve University Cleveland OH 44106 USAArnold I. CaplanDepartment of Biology, Skeletal Research Center &, Center for Multimodal Evaluation of Engineered Cartilage Case Western Reserve University Cleveland OH 44106 USAChung-Chiun LiuDepartment of Chemical and Biomolecular Engineering, Electronics Design Center Case Western Reserve University Cleveland OH 44106 USA
2019en
ABI

Аннотация

Abstract An accurate, rapid, and cost‐effective biosensor for the quantification of disease biomarkers is vital for the development of early‐diagnostic point‐of‐care systems. The recent discovery of the trans‐cleavage property of CRISPR type V effectors makes CRISPR a potential high‐accuracy bio‐recognition tool. Herein, a CRISPR‐Cas12a (cpf1) based electrochemical biosensor (E‐CRISPR) is reported, which is more cost‐effective and portable than optical‐transduction‐based biosensors. Through optimizing the in vitro trans‐cleavage activity of Cas12a, E‐CRIPSR was used to detect viral nucleic acids, including human papillomavirus 16 (HPV‐16) and parvovirus B19 (PB‐19), with a picomolar sensitivity. An aptamer‐based E‐CRISPR cascade was further designed for the detection of transforming growth factor β1 (TGF‐β1) protein in clinical samples. As demonstrated, E‐CRISPR could enable the development of portable, accurate, and cost‐effective point‐of‐care diagnostic systems.

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