Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10
Marc A. SuchardDepartment of Biomathematics, David Geffen School of MedicineUniversity of California, Los Angeles, 621 Charles E. Young Dr., South, Los Angeles, CA, 90095 USAPhilippe LemeyDepartment of Microbiology and Immunology, Rega Institute, KU Leuven, Herestraat 49, 3000 Leuven, BelgiumGuy BaeleDepartment of Microbiology and Immunology, Rega Institute, KU Leuven, Herestraat 49, 3000 Leuven, BelgiumDaniel L. AyresCenter for Bioinformatics and Computational Biology, University of Maryland, College Park, 125 Biomolecular Science Bldg #296, College Park, MD 20742 USAAlexei J. DrummondCentre for Computational Evolution, University of Auckland, 303/38 Princes St., Auckland, 1010 NZAndrew RambautInstitute of Evolutionary Biology, University of Edinburgh, Ashworth Laboratories, Edinburgh, EH9 3FL UK
2018en
ABI
Аннотация
The Bayesian Evolutionary Analysis by Sampling Trees (BEAST) software package has become a primary tool for Bayesian phylogenetic and phylodynamic inference from genetic sequence data. BEAST unifies molecular phylogenetic reconstruction with complex discrete and continuous trait evolution, divergence-time dating, and coalescent demographic models in an efficient statistical inference engine using Markov chain Monte Carlo integration. A convenient, cross-platform, graphical user interface allows the flexible construction of complex evolutionary analyses.
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