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To dry perchance to live: Insights from the genome of the desiccation‐tolerant biocrust moss <i>Syntrichia caninervis</i>

Anderson Tadeu SilvaDivision of Plant Sciences and Interdisciplinary Plant Group University of Missouri Columbia Missouri 65211 USABei GaoState Key Laboratory of Desert and Oasis Ecology Xinjiang Institute of Ecology and Geography Chinese Academy of Science Urumqi 830011 ChinaKirsten M. FisherDepartment of Biological Sciences California State University Los Angeles California 90032 USABrent D. MishlerDepartment of Integrative Biology University and Jepson Herbaria University of California Berkeley California 94720‐2465 USAJenna T. B. EkwealorDepartment of Integrative Biology University and Jepson Herbaria University of California Berkeley California 94720‐2465 USALloyd R. StarkSchool of Life Sciences University of Nevada Las Vegas Nevada 89154‐4004 USAXiaoshuang LiState Key Laboratory of Desert and Oasis Ecology Xinjiang Institute of Ecology and Geography Chinese Academy of Science Urumqi 830011 ChinaDaoyuan ZhangState Key Laboratory of Desert and Oasis Ecology Xinjiang Institute of Ecology and Geography Chinese Academy of Science Urumqi 830011 ChinaMatthew A. BowkerSchool of Forestry Northern Arizona University Flagstaff Arizona 86011 USAJohn C. BrindaMissouri Botanical Garden St. Louis Missouri 63110‐0299 USAKirsten K. CoeDepartment of Biology Middlebury College Middlebury Vermont 40506‐0225 USAMelvin J. OliverDivision of Plant Sciences and Interdisciplinary Plant Group University of Missouri Columbia Missouri 65211 USA
2020en
ABI

Аннотация

With global climate change, water scarcity threatens whole agro/ecosystems. The desert moss Syntrichia caninervis, an extremophile, offers novel insights into surviving desiccation and heat. The sequenced S. caninervis genome consists of 13 chromosomes containing 16 545 protein-coding genes and 2666 unplaced scaffolds. Syntenic relationships within the S. caninervis and Physcomitrella patens genomes indicate the S. caninervis genome has undergone a single whole genome duplication event (compared to two for P. patens) and evidence suggests chromosomal or segmental losses in the evolutionary history of S. caninervis. The genome contains a large sex chromosome composed primarily of repetitive sequences with a large number of Copia and Gypsy elements. Orthogroup analyses revealed an expansion of ELIP genes encoding proteins important in photoprotection. The transcriptomic response to desiccation identified four structural clusters of novel genes. The genomic resources established for this extremophile offer new perspectives for understanding the evolution of desiccation tolerance in plants.

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