A Draft Sequence of the Rice Genome ( <i>Oryza sativa</i> L. ssp. <i>indica</i> )
Jun YuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaSongnian HuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJun WangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaGane Ka‐Shu WongBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaSonggang LiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaBin LiuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaYajun DengBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaLi DaiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaYan ZhouFudan University, Shanghai 200433, ChinaXiuqing ZhangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaMengliang CaoNational Hybrid Rice R&D Center, Changsha 410125, ChinaJing LiuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJiandong SunBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJiabin TangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaYanjiong ChenBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaXiaobing HuangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaWei LinHangzhou Genomics Institute–Institute of Bioinformatics of Zhejiang University–Key Laboratory of Bioinformatics of Zhejiang Province, Hangzhou 310007, ChinaChen YeBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaTong WeiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaLijuan CongBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJianing GengBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaYujun HanBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaLin LiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaWei LiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaGuangqiang HuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaXiangang HuangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaWenjie LiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJian LiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaZhanwei LiuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaLong LiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJianping LiuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaQiuhui QiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJinsong LiuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaLi LiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaTao LiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaXuegang WangInstitute of Genetics and Developmental BiologyHong LüBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaTingting WuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaMiao ZhuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaPeixiang NiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaHua HanBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaWei DongBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaXiaoyu RenBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaXiaoli FengBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaPeng CuiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaXianran LiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaHao WangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaXin XuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaWenxue ZhaiInstitute of Genetics, Chinese Academy of Sciences, Beijing 100101, ChinaXu ZhaoBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJin‐Song ZhangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaSijie HeInstitute of Genetics, Chinese Academy of Sciences, Beijing 100101, ChinaJianguo ZhangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJichen XuInstitute of Genetics, Chinese Academy of Sciences, Beijing 100101, ChinaKunlin ZhangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaXianwu ZhengInstitute of Genetics, Chinese Academy of Sciences, Beijing 100101, ChinaJianhai DongHangzhou Genomics Institute–Institute of Bioinformatics of Zhejiang University–Key Laboratory of Bioinformatics of Zhejiang Province, Hangzhou 310007, ChinaWanyong ZengInstitute of Genetics, Chinese Academy of Sciences, Beijing 100101, ChinaLin TaoHangzhou Genomics Institute–Institute of Bioinformatics of Zhejiang University–Key Laboratory of Bioinformatics of Zhejiang Province, Hangzhou 310007, ChinaJia YeHangzhou Genomics Institute–Institute of Bioinformatics of Zhejiang University–Key Laboratory of Bioinformatics of Zhejiang Province, Hangzhou 310007, ChinaJun TanHangzhou Genomics Institute–Institute of Bioinformatics of Zhejiang University–Key Laboratory of Bioinformatics of Zhejiang Province, Hangzhou 310007, ChinaXide RenBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaXuewei ChenInstitute of Genetics, Chinese Academy of Sciences, Beijing 100101, ChinaJun HeHangzhou Genomics Institute–Institute of Bioinformatics of Zhejiang University–Key Laboratory of Bioinformatics of Zhejiang Province, Hangzhou 310007, ChinaDaofeng LiuInstitute of Genetics, Chinese Academy of Sciences, Beijing 100101, ChinaWei TianHangzhou Genomics Institute–Institute of Bioinformatics of Zhejiang University–Key Laboratory of Bioinformatics of Zhejiang Province, Hangzhou 310007, ChinaChaoguang TianBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaHongai XiaBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaQiyu BaoBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaGang LiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaHui GaoBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaTing CaoBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJuan WangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaWenming ZhaoBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaPing LiInstitute of Genetics, Chinese Academy of Sciences, Beijing 100101, ChinaWei ChenBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaXudong WangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaYong ZhangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJianfei HuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJing WangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaSong LiuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJian YangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaGuangyu ZhangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaYuqing XiongBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaZhijie LiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaLong MaoInstitute of Genetics, Chinese Academy of Sciences, Beijing 100101, ChinaChengshu ZhouNational Hybrid Rice R&D Center, Changsha 410125, ChinaZhen ZhuInstitute of Genetics, Chinese Academy of Sciences, Beijing 100101, ChinaRunsheng ChenBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaBailin HaoHangzhou Genomics Institute–Institute of Bioinformatics of Zhejiang University–Key Laboratory of Bioinformatics of Zhejiang Province, Hangzhou 310007, ChinaWei‐Mou ZhengBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaShouyi ChenInstitute of Genetics, Chinese Academy of Sciences, Beijing 100101, ChinaWei GuoDigital China Ltd., Beijing 100080, ChinaGuojie LiBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaSiqi LiuBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaMing TaoBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaJian WangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, ChinaLihuang ZhuInstitute of Genetics, Chinese Academy of Sciences, Beijing 100101, ChinaLongping YuanNational Hybrid Rice R&D Center, Changsha 410125, ChinaHuanming YangBeijing Genomics Institute/Center of Genomics and Bioinformatics, Chinese Academy of Sciences, Beijing 101300, China
2002en
ABI
Аннотация
The genome of the japonica subspecies of rice, an important cereal and model monocot, was sequenced and assembled by whole-genome shotgun sequencing. The assembled sequence covers 93% of the 420-megabase genome. Gene predictions on the assembled sequence suggest that the genome contains 32,000 to 50,000 genes. Homologs of 98% of the known maize, wheat, and barley proteins are found in rice. Synteny and gene homology between rice and the other cereal genomes are extensive, whereas synteny with Arabidopsis is limited. Assignment of candidate rice orthologs to Arabidopsis genes is possible in many cases. The rice genome sequence provides a foundation for the improvement of cereals, our most important crops.
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