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ModelTest-NG: A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models

Diego DarribaComputational Molecular Evolution Group, Heidelberg Institute for Theoretical Studies, Heidelberg, GermanyDavid PosadaBiomedical Research Center (CINBIO), University of Vigo, Vigo, SpainAlexey M. KozlovComputational Molecular Evolution Group, Heidelberg Institute for Theoretical Studies, Heidelberg, GermanyAlexandros StamatakisComputational Molecular Evolution Group, Heidelberg Institute for Theoretical Studies, Heidelberg, GermanyBenoît MorelComputational Molecular Evolution Group, Heidelberg Institute for Theoretical Studies, Heidelberg, GermanyTomáš FlouriDepartment of Genetics, Evolution and Environment, University College London, London, United Kingdom
2019en
ABI

Аннотация

ModelTest-NG is a reimplementation from scratch of jModelTest and ProtTest, two popular tools for selecting the best-fit nucleotide and amino acid substitution models, respectively. ModelTest-NG is one to two orders of magnitude faster than jModelTest and ProtTest but equally accurate and introduces several new features, such as ascertainment bias correction, mixture, and free-rate models, or the automatic processing of single partitions. ModelTest-NG is available under a GNU GPL3 license at https://github.com/ddarriba/modeltest , last accessed September 2, 2019.

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