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A telomere-to-telomere genome assembly of the cultivated peanut

Xiaobo WangThe Shennong Laboratory, Zhengzhou 450002, China; Institute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, ChinaZiqi SunThe Shennong Laboratory, Zhengzhou 450002, China; Institute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaFeiyan QiThe Shennong Laboratory, Zhengzhou 450002, China; Institute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaZhi‐Yuan ZhouInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, ChinaPei DuThe Shennong Laboratory, Zhengzhou 450002, China; Institute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaLei ShiThe Shennong Laboratory, Zhengzhou 450002, China; Institute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaWenzhao DongInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaBingyan HuangInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaHan SuoyiInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaStefano PavanNational Innovation Centre for Bio-breeding Industry, Xinxiang 453000, China; Department of Soil, Plant and Food Sciences, University of Bari Aldo Moro, Bari 70126, ItalyMeng ZhangInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaMengjie CuiThe Shennong Laboratory, Zhengzhou 450002, China; Institute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaJing XuInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaHua LiuInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaLi QinInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaZhongxin ZhangInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaXiaodong DaiInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaWei GaoInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaLijuan MiaoInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaRuifang ZhaoInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaDi WangInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaMengmeng WangInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaChenyang ZhiInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaYaojun HuInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaHuanhuan ZhaoInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaLinjie ChenInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaXiaodong JinInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaYanhui SunInstitute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, ChinaZheng ZhengThe Shennong Laboratory, Zhengzhou 450002, China; Institute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, China. Electronic address: [email protected]Xinyou ZhangThe Shennong Laboratory, Zhengzhou 450002, China; Institute of Crop Molecular Breeding, Henan Academy of Agricultural Sciences, Zhengzhou 450002, China; Henan Provincial Key Laboratory for Genetic Improvement of Oil Crops, Zhengzhou 450002, China; National Innovation Centre for Bio-breeding Industry, Xinxiang 453000, China. Electronic address: [email protected]
2024en
ABI

Аннотация

Cultivated peanut (peanut in short) (Arachis hypogaea, 2n = 4x = 40, genome type AABB) is a legume crop serving globally as a crucial source of edible oil and protein. Available peanut reference genome sequences obtained for the cultivars “Tifrunner,” “Shitouqi,” and “Fuhuasheng” were assembled or patched using third-generation sequencing technologies and significantly contributed to advancements in peanut genetics and breeding (Bertioli et al., 2019; Chen et al., 2019; Zhuang et al., 2019). However, unresolved gaps persist in these assemblies, particularly in regions of biological importance such as centromeres and telomeres (Supplemental Figure 1), hindering comprehensive exploration of their functional and evolutionary significance.

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