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Иш: Analysis of complete chloroplast genome sequences and insight into the phylogenetic relationships of Ferula L.

  1. MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

    Fredrik Ronquist, Maxim Teslenko, Paul van der Mark +7

    Мақола201274 иқтибос
    ABI

  2. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

    Alexandros Stamatakis

    Мақола201469 иқтибос
    ABI

  3. Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

    Matthew D. Kearse, Richard Moir, Amy Wilson +11

    Мақола201263 иқтибос
    ABI

  4. jModelTest 2: more models, new heuristics and parallel computing

    Diego Darriba, Guillermo L. Taboada, Ramón Doallo +1

    Бошқа201245 иқтибос
    ABI

  5. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes

    Jian‐Jun Jin, Wen-Bin Yu, Jun-Bo Yang +4

    Мақола202041 иқтибос
    ABI

  6. DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets

    Julio Rozas, Albert Ferrer-Mata, Juan Carlos Sánchez-DelBarrio +4

    Мақола201737 иқтибос
    ABI

  7. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization

    Kazutaka Katoh, John Rozewicki, Kazunori Yamada

    Мақола201729 иқтибос
    ABI

  8. REPuter: the manifold applications of repeat analysis on a genomic scale

    Stefan Kurtz

    Мақола200127 иқтибос
    ABI

  9. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

    Salvador Capella-Gutiérrez, José M. Silla-Martínez, Toni Gabaldón

    Мақола200926 иқтибос
    ABI

  10. Bandage: interactive visualization of <i>de novo</i> genome assemblies

    Ryan R. Wick, Mark B. Schultz, Justin Zobel +1

    Мақола201525 иқтибос
    ABI

  11. PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies

    Dong Zhang, Fangluan Gao, Ivan Jakovlić +4

    Мақола201925 иқтибос
    ABI

  12. Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation

    Ivica Letunić, Peer Bork

    Мақола202123 иқтибос
    ABI

  13. Illumina Sequencing Library Preparation for Highly Multiplexed Target Capture and Sequencing

    Matthias Meyer, Martin Kircher

    Мақола201021 иқтибос
    ABI

  14. The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

    Susann Wicke, Gerald M. Schneeweiss, Claude W. dePamphilis +2

    Мақола201121 иқтибос
    ABI

  15. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

    Anton Bankevich, Sergey Nurk, Dmitry Antipov +13

    Мақола201218 иқтибос
    ABI

  16. OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets

    Marc Lohse, Oliver Drechsel, Sabine Kahlau +1

    Мақола201318 иқтибос
    ABI

  17. The World Checklist of Vascular Plants, a continuously updated resource for exploring global plant diversity

    Rafaël Govaerts, Eimear Nic Lughadha, Nicholas Black +2

    Мақола202118 иқтибос
    ABI

  18. Carpology of the species of <i>Ferula</i> subgen. <i>Merwia</i> (Umbelliferae–Apioideae) and some taxonomic implications

    Л.К. Сафина, Т. А. Остроумова, M. G. Pimenov

    Мақола201416 иқтибос
    ABI

  19. Phylogenetic position of the genus Ferula (Apiaceae) and its placement in tribe Scandiceae as inferred from nrDNA ITS sequence variation

    Renata Kurzyna‐Młynik, Alexei A. Oskolski, Stephen R. Downie +3

    Мақола200816 иқтибос
    ABI

  20. Taxonomy of the traditional medicinal plant genus Ferula (Apiaceae) is confounded by incongruence between nuclear rDNA and plastid DNA

    Mehrnoush Panahi, Łukasz Banasiak, Marcin Piwczyński +6

    Мақола201816 иқтибос
    ABI

  21. Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements

    Aaron E. Darling, Bob Mau, Frederick R. Blattner +1

    Мақола200415 иқтибос
    ABI

  22. CpGAVAS, an integrated web server for the annotation, visualization, analysis, and GenBank submission of completely sequenced chloroplast genome sequences

    Chang Liu, Linchun Shi, Yingjie Zhu +4

    Мақола201215 иқтибос
    ABI

  23. Ferula asafoetida : Traditional uses and pharmacological activity

    Poonam Mahendra, Shradha Bisht

    Мақола201215 иқтибос
    ABI

  24. Evolutionary dynamics of the plastid inverted repeat: the effects of expansion, contraction, and loss on substitution rates

    Andan Zhu, Wenhu Guo, Sakshi Gupta +2

    Мақола201515 иқтибос
    ABI

  25. Phylogenetic relationships among <i>Dorema</i> , <i>Ferula</i> and <i>Leutea</i> (Apiaceae: Scandiceae: Ferulinae) inferred from nrDNA ITS and cpDNA noncoding sequences

    Mehrnoush Panahi, Łukasz Banasiak, Marcin Piwczyński +3

    Мақола201515 иқтибос
    ABI