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Иш: Molecular and morphological evidence support merging <i>Autumnalia</i> , <i>Fergania</i> , and <i>Kafirnigania</i> into <i>Ferula</i> (Apiaceae)

  1. MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

    Kazutaka Katoh, Daron M. Standley

    Мақола201389 иқтибос
    ABI

  2. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

    Alexandros Stamatakis

    Мақола201486 иқтибос
    ABI

  3. MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

    Fredrik Ronquist, Maxim Teslenko, Paul van der Mark +7

    Мақола201282 иқтибос
    ABI

  4. Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

    Matthew D. Kearse, Richard Moir, Amy Wilson +11

    Мақола201273 иқтибос
    ABI

  5. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes

    Jian‐Jun Jin, Wen-Bin Yu, Jun-Bo Yang +4

    Мақола202047 иқтибос
    ABI

  6. ModelFinder: fast model selection for accurate phylogenetic estimates

    Subha Kalyaanamoorthy, Bùi Quang Minh, Thomas K. F. Wong +2

    Мақола201731 иқтибос
    ABI

  7. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

    Salvador Capella-Gutiérrez, José M. Silla-Martínez, Toni Gabaldón

    Мақола200929 иқтибос
    ABI

  8. Bandage: interactive visualization of <i>de novo</i> genome assemblies

    Ryan R. Wick, Mark B. Schultz, Justin Zobel +1

    Мақола201527 иқтибос
    ABI

  9. PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies

    Dong Zhang, Fangluan Gao, Ivan Jakovlić +4

    Мақола201927 иқтибос
    ABI

  10. Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation

    Ivica Letunić, Peer Bork

    Мақола202126 иқтибос
    ABI

  11. SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

    Anton Bankevich, Sergey Nurk, Dmitry Antipov +13

    Мақола201222 иқтибос
    ABI

  12. OrganellarGenomeDRAW—a suite of tools for generating physical maps of plastid and mitochondrial genomes and visualizing expression data sets

    Marc Lohse, Oliver Drechsel, Sabine Kahlau +1

    Мақола201319 иқтибос
    ABI

  13. Phylogenetic position of the genus Ferula (Apiaceae) and its placement in tribe Scandiceae as inferred from nrDNA ITS sequence variation

    Renata Kurzyna‐Młynik, Alexei A. Oskolski, Stephen R. Downie +3

    Мақола200819 иқтибос
    ABI

  14. Taxonomy of the traditional medicinal plant genus Ferula (Apiaceae) is confounded by incongruence between nuclear rDNA and plastid DNA

    Mehrnoush Panahi, Łukasz Banasiak, Marcin Piwczyński +6

    Мақола201818 иқтибос
    ABI

  15. Phylogenetic relationships among <i>Dorema</i> , <i>Ferula</i> and <i>Leutea</i> (Apiaceae: Scandiceae: Ferulinae) inferred from nrDNA ITS and cpDNA noncoding sequences

    Mehrnoush Panahi, Łukasz Banasiak, Marcin Piwczyński +3

    Мақола201517 иқтибос
    ABI

  16. CpGAVAS, an integrated web server for the annotation, visualization, analysis, and GenBank submission of completely sequenced chloroplast genome sequences

    Chang Liu, Linchun Shi, Yingjie Zhu +4

    Мақола201216 иқтибос
    ABI

  17. Backbone phylogeny and evolution of Apioideae (Apiaceae): New insights from phylogenomic analyses of plastome data

    Jun Wen, Deng‐Feng Xie, Megan Price +5

    Мақола202114 иқтибос
    ABI

  18. An updated tribal classification of Lamiaceae based on plastome phylogenomics

    Fei Zhao, Yaping Chen, Yasaman Salmaki +12

    Мақола202110 иқтибос
    ABI

  19. phytools: an R package for phylogenetic comparative biology (and other things)

    Liam J. Revell

    Мақола201110 иқтибос
    ABI

  20. Resolving the phylogenetic position of <i>Ombrocharis</i> (Lamiaceae), with reference to the molecular phylogeny of tribe Elsholtzieae

    Yaping Chen, Bryan T. Drew, Bo Li +2

    Мақола20167 иқтибос
    ABI

  21. Analysis of complete chloroplast genome sequences and insight into the phylogenetic relationships of Ferula L.

    Lei Yang, Ozodbek Abduraimov, Komiljon Tojibaev +3

    МақолаPlant chemical constituents analysisBMC Genomics20226 иқтибос
    ABI

  22. <i>Salvia</i> united: The greatest good for the greatest number

    Bryan T. Drew, Jesús Guadalupe González‐Gallegos, Chun‐Lei Xiang +4

    Мақола20176 иқтибос
    ABI

  23. Major clades within Apiaceae subfamily Apioideae as inferred by phylogenetic analysis of nrDNA ITS sequences

    Stephen R. Downie, Krzysztof Spalik, Deborah S. Katz‐Downie +1

    Мақола20105 иқтибос
    ABI

  24. Contrasting nuclear‐plastidial phylogenetic patterns in the recently diverged Iberian <i>Phlomis crinita</i> and <i>P. lychnitis</i> lineages (Lamiaceae)

    Rafael G. Albaladejo, Javier Aguilar, Abelardo Aparicio +1

    Мақола20055 иқтибос
    ABI

  25. Ribosomal ITS sequences and plant phylogenetic inference

    Inés Álvarez, Jonathan F. Wendel

    Шарҳ мақола20034 иқтибос
    ABI