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126 ta ish

Ish: A global phylogeny of Phlomoides (Lamiaceae, Lamioideae) based on chloroplast genomes: insights into infrageneric classification, character evolution, biogeography, and diversification

  1. MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

    Kazutaka Katoh, Daron M. Standley

    MaqolaOchiq kirish201397 iqtibos
    ABI

  2. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

    Alexandros Stamatakis

    MaqolaOchiq kirish201491 iqtibos
    ABI

  3. MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

    Fredrik Ronquist, Maxim Teslenko, Paul van der Mark +7

    MaqolaOchiq kirish201283 iqtibos
    ABI

  4. Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

    Matthew D. Kearse, Richard Moir, Amy Wilson +11

    MaqolaOchiq kirish201276 iqtibos
    ABI

  5. jModelTest 2: more models, new heuristics and parallel computing

    Diego Darriba, Guillermo L. Taboada, Ramón Doallo +1

    BoshqaOchiq kirish201253 iqtibos
    ABI

  6. GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes

    Jian‐Jun Jin, Wen-Bin Yu, Jun-Bo Yang +4

    MaqolaOchiq kirish202048 iqtibos
    ABI

  7. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

    Salvador Capella-Gutiérrez, José M. Silla-Martínez, Toni Gabaldón

    MaqolaOchiq kirish200931 iqtibos
    ABI

  8. Maximum entropy modeling of species geographic distributions

    Steven J. Phillips, Robert P. Anderson, Robert E. Schapire

    Maqola200531 iqtibos
    ABI

  9. fastp: an ultra-fast all-in-one FASTQ preprocessor

    Shifu Chen, Yanqing Zhou, Yaru Chen +1

    MaqolaOchiq kirish201828 iqtibos
    ABI

  10. Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7

    Andrew Rambaut, Alexei J. Drummond, Dong Xie +2

    MaqolaOchiq kirish201824 iqtibos
    ABI

  11. Biodiversity hotspots for conservation priorities

    Norman Myers, Russell A. Mittermeier, Cristina G. Mittermeier +2

    Maqola200024 iqtibos
    ABI

  12. Creating the CIPRES Science Gateway for inference of large phylogenetic trees

    Mark A. Miller, Wayne Pfeiffer, Terri Schwartz

    Maqola201016 iqtibos
    ABI

  13. Phylogeny of the tribe Phlomideae (Lamioideae: Lamiaceae) with special focus on <i>Eremostachys</i> and <i>Phlomoides</i> : New insights from nuclear and chloroplast sequences

    Yasaman Salmaki, Shahin Zarré, Olof Ryding +4

    Maqola201211 iqtibos
    ABI

  14. spThin: an R package for spatial thinning of species occurrence records for use in ecological niche models

    Matthew E. Aiello‐Lammens, Robert A. Boria, Aleksandar Radosavljević +2

    Maqola201511 iqtibos
    ABI

  15. phytools: an R package for phylogenetic comparative biology (and other things)

    Liam J. Revell

    Maqola201110 iqtibos
    ABI

  16. Uncertainties of Climate Change in Arid Environments of Central Asia

    Elena Lioubimtseva, Roy Cole

    Maqola20069 iqtibos
    ABI

  17. PGA: a software package for rapid, accurate, and flexible batch annotation of plastomes

    Xiao‐Jian Qu, Michael J. Moore, Li D +1

    MaqolaOchiq kirish20199 iqtibos
    ABI

  18. RASP (Reconstruct Ancestral State in Phylogenies): A tool for historical biogeography

    Yan Yu, AJ Harris, Christopher Blair +1

    Maqola20158 iqtibos
    ABI

  19. Molecular Phylogenetics, Character Evolution, and Suprageneric Classification of Lamioideae (Lamiaceae)<sup>1</sup>

    Anne‐Cathrine Scheen, Mika Bendiksby, Olof Ryding +3

    MaqolaOchiq kirish20108 iqtibos
    ABI

  20. An updated phylogeny and classification of Lamiaceae subfamily Lamioideae

    Mika Bendiksby, Lisbeth Thorbek, Anne‐Cathrine Scheen +2

    Maqola20118 iqtibos
    ABI

  21. Phylogeny and biogeography of the lamioid genus Phlomis (Lamiaceae)

    Cecilie Mathiesen, Anne‐Cathrine Scheen, Charlotte Lindqvist

    Maqola20118 iqtibos
    ABI

  22. Evolution of Asian monsoons and phased uplift of the Himalaya–Tibetan plateau since Late Miocene times

    Zhisheng An, John E. Kutzbach, Warren L Prell +1

    Maqola20017 iqtibos
    ABI

  23. Onset of Asian desertification by 22 Myr ago inferred from loess deposits in China

    Zhengtang Guo, William F Ruddiman, Qingzhen Hao +7

    Maqola20027 iqtibos
    ABI

  24. What controlled Mid–Late Miocene long-term aridification in Central Asia? — Global cooling or Tibetan Plateau uplift: A review

    Yunfa Miao, Mark Herrmann, Fuli Wu +2

    Sharh maqolaOchiq kirish20126 iqtibos
    ABI

  25. Phylogeny and staminal evolution of Salvia (Lamiaceae, Nepetoideae) in East Asia

    Guo‐Xiong Hu, Atsuko Takano, Bryan T. Drew +4

    MaqolaOchiq kirish20186 iqtibos
    ABI