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65 ta ish

Ish: Whole genome sequencing reveals the phylogenetic relationships and reticulate evolution of Phrynocephalus lizards in Eurasia

  1. ModelFinder: fast model selection for accurate phylogenetic estimates

    Subha Kalyaanamoorthy, Bùi Quang Minh, Thomas K. F. Wong +2

    MaqolaOchiq kirish201735 iqtibos
    ABI

  2. IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

    Lam-Tung Nguyen, Heiko A. Schmidt, Arndt von Haeseler +1

    MaqolaOchiq kirish201431 iqtibos
    ABI

  3. Trimmomatic: a flexible trimmer for Illumina sequence data

    Anthony Bolger, Marc Lohse, Björn Usadel

    MaqolaOchiq kirish201430 iqtibos
    ABI

  4. PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies

    Dong Zhang, Fangluan Gao, Ivan Jakovlić +4

    MaqolaOchiq kirish201927 iqtibos
    ABI

  5. The variant call format and VCFtools

    Petr Danecek, Adam Auton, Gonçalo R. Abecasis +10

    MaqolaOchiq kirish201121 iqtibos
    ABI

  6. Ancient Admixture in Human History

    Nick Patterson, Priya Moorjani, Yontao Luo +6

    MaqolaOchiq kirish201216 iqtibos
    ABI

  7. PAML 4: Phylogenetic Analysis by Maximum Likelihood

    Z. Yang

    MaqolaOchiq kirish200711 iqtibos
    ABI

  8. Second-generation PLINK: rising to the challenge of larger and richer datasets

    Christopher Chang, Carson C. Chow, Laurent CAM Tellier +3

    MaqolaOchiq kirish201510 iqtibos
    ABI

  9. phytools: an R package for phylogenetic comparative biology (and other things)

    Liam J. Revell

    Maqola201110 iqtibos
    ABI

  10. Model Selection in Historical Biogeography Reveals that Founder-Event Speciation Is a Crucial Process in Island Clades

    Nicholas J. Matzke

    Maqola20147 iqtibos
    ABI

  11. ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R

    Emmanuel Paradis, Klaus Schliep

    Maqola20187 iqtibos
    ABI

  12. Regionwide and Nationwide Floristic Richness Reveal Vascular Plant Diversity in Central Asia

    Suliya Ma, Wenjun Li, Komiljon Tojibaev +3

    MaqolaOchiq kirishPlant Parasitism and ResistancePlants20246 iqtibos
    ABI

  13. ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees

    Chao Zhang, Maryam Rabiee, Erfan Sayyari +1

    Maqola20185 iqtibos
    ABI

  14. Historical biogeography, phylogenetic relationships and intraspecific diversity of agamid lizards in the Central Asian deserts of Kazakhstan and Uzbekistan

    Jane Melville, Joshua M. Hale, Γεωργία Μάντζιου +3

    Maqola20094 iqtibos
    ABI

  15. Cenozoic aridization in Central Eurasia shaped diversification of toad-headed agamas ( <i>Phrynocephalus</i> ; Agamidae, Reptilia)

    Evgeniya N. Solovyeva, Vladimir S. Lebedev, E. A. Dunayev +5

    MaqolaOchiq kirish20184 iqtibos
    ABI

  16. Hotspots within a global biodiversity hotspot - areas of endemism are associated with high mountain ranges

    Jalil Noroozi, Amir Talebi, Moslem Doostmohammadi +3

    Maqola20184 iqtibos
    ABI

  17. Comparison of phylogenetic trees

    D. F. Robinson, L. R. Foulds

    Maqola19814 iqtibos
    ABI

  18. Application of Phylogenetic Networks in Evolutionary Studies

    Daniel H. Huson, David Bryant

    Maqola20054 iqtibos
    ABI

  19. <i>OptM</i>: estimating the optimal number of migration edges on population trees using <i>Treemix</i>

    Robert R. Fitak

    Maqola20214 iqtibos
    ABI

  20. The Miocene: The Future of the Past

    Margret Steinthorsdottir, Helen K. Coxall, Agatha M. de Boer +20

    MaqolaOchiq kirish20203 iqtibos
    ABI

  21. Dsuite ‐ Fast <i>D</i> ‐statistics and related admixture evidence from VCF files

    Milan Malinsky, Michael Matschiner, Hannes Svardal

    Maqola20203 iqtibos
    ABI

  22. Incongruence in the phylogenomics era

    Jacob L. Steenwyk, Yuanning Li, Xiaofan Zhou +2

    Sharh maqola20233 iqtibos
    ABI

  23. Neogene uplift of the Tian Shan Mountains observed in the magnetic record of the Jingou River section (northwest China)

    Julien Charreau, Yan Chen, Stuart A. Gilder +8

    Maqola20093 iqtibos
    ABI

  24. Hybridization as an invasion of the genome

    James Mallet

    Maqola20053 iqtibos
    ABI

  25. A new biologic paleoaltimetry indicating Late Miocene rapid uplift of northern Tibet Plateau

    Yunfa Miao, Xiaomin Fang, Jimin Sun +14

    Maqola20223 iqtibos
    ABI