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Ish: Ancient Plasmodium genomes shed light on the history of human malaria

Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation
Ivica Letunić, Peer Bork
Maqola202123 iqtibos
ABI
The Sequence Alignment/Map format and SAMtools
Heng Li, Bob Handsaker, Alec Wysoker +7
Maqola200922 iqtibos
ABI
Fast and accurate short read alignment with Burrows–Wheeler transform
Heng Li, Richard Durbin
Maqola200921 iqtibos
ABI
Illumina Sequencing Library Preparation for Highly Multiplexed Target Capture and Sequencing
Matthias Meyer, Martin Kircher
Maqola201021 iqtibos
ABI
Fast model-based estimation of ancestry in unrelated individuals
David H. Alexander, John Novembre, Kenneth Lange
Maqola200919 iqtibos
ABI
fastp: an ultra-fast all-in-one FASTQ preprocessor
Shifu Chen, Yanqing Zhou, Yaru Chen +1
Maqola201818 iqtibos
ABI
PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage Analyses
Shaun Purcell, Benjamin M. Neale, Katherine EO Todd-Brown +8
Maqola200715 iqtibos
ABI
Ancient Admixture in Human History
Nick Patterson, Priya Moorjani, Yontao Luo +6
Maqola201214 iqtibos
ABI
Population Structure and Eigenanalysis
Nick Patterson, Alkes L. Price, David Reich
Maqola20068 iqtibos
ABI
Massive migration from the steppe was a source for Indo-European languages in Europe
Wolfgang Haak, Iosif Lazaridis, Nick Patterson +36
Maqola20158 iqtibos
ABI
Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments
Jesse Dabney, Michael Knapp, Isabelle Glocke +8
Maqola20137 iqtibos
ABI
Principal components analysis corrects for stratification in genome-wide association studies
Alkes L. Price, Nick J. Patterson, Robert M. Plenge +3
Maqola20066 iqtibos
ABI
Genome-wide patterns of selection in 230 ancient Eurasians
Iain Mathieson, Iosif Lazaridis, Nadin Rohland +35
Maqola20156 iqtibos
ABI
DNA analysis of an early modern human from Tianyuan Cave, China
Qiaomei Fu, Matthias Meyer, Xing Gao +4
Maqola20135 iqtibos
ABI
Partial uracil–DNA–glycosylase treatment for screening of ancient DNA
Nadin Rohland, Éadaoin Harney, Swapan Mallick +2
Maqola20145 iqtibos
ABI
leeHom: adaptor trimming and merging for Illumina sequencing reads
Gabriel Renaud, Udo Stenzel, Janet Kelso
Maqola20144 iqtibos
ABI
Extraction of highly degraded DNA from ancient bones, teeth and sediments for high-throughput sequencing
Nadin Rohland, Isabelle Glocke, Ayinuer Aximu‐Petri +1
Maqola20184 iqtibos
ABI
AdapterRemoval v2: rapid adapter trimming, identification, and read merging
Mikkel Schubert, Stinus Lindgreen, Ludovic Orlando
Maqola20164 iqtibos
ABI
A framework for variation discovery and genotyping using next-generation DNA sequencing data
Mark A. DePristo, Eric Banks, Ryan Poplin +15
Maqola20114 iqtibos
ABI
Solid-phase reversible immobilization for the isolation of PCR products
Margaret M. DeAngelis, David G. Wang, Trevor Hawkins
Maqola19953 iqtibos
ABI
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan, Ira M. Hall
Maqola20103 iqtibos
ABI
MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data
Daniel H. Huson, Sina Beier, Isabell Flade +5
Maqola20163 iqtibos
ABI
Single-stranded DNA library preparation from highly degraded DNA using<i>T4</i>DNA ligase
Marie-Theres Gansauge, Tobias Gerber, Isabelle Glocke +6
Maqola20172 iqtibos
ABI
Sarlavhasiz
Boshqa2 iqtibos
ABI
An efficient and scalable analysis framework for variant extraction and refinement from population-scale DNA sequence data
Goo Jun, Mary Kate Wing, Gonçalo R. Abecasis +1
Maqola20152 iqtibos
ABI