Ushbu ish iqtibos qilgan ishlar

117 ta ish

Ish: Pangenome-wide characterization of the TCP gene family and its potential role in regulating adventitious shoot regeneration in apple

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen, Heiko A. Schmidt, Arndt von Haeseler +1
Maqola201428 iqtibos
ABI
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutiérrez, José M. Silla-Martínez, Toni Gabaldón
Maqola200926 iqtibos
ABI
The Sequence Alignment/Map format and SAMtools
Heng Li, Bob Handsaker, Alec Wysoker +7
Maqola200922 iqtibos
ABI
MUSCLE: multiple sequence alignment with high accuracy and high throughput
R. C. Edgar
Maqola200418 iqtibos
ABI
fastp: an ultra-fast all-in-one FASTQ preprocessor
Shifu Chen, Yanqing Zhou, Yaru Chen +1
Maqola201818 iqtibos
ABI
HISAT: a fast spliced aligner with low memory requirements
Daehwan Kim, Ben Langmead, Steven L. Salzberg
Maqola20157 iqtibos
ABI
The genome of the domesticated apple (Malus × domestica Borkh.)
Riccardo Velasco, Andrey Zharkikh, Jason P. Affourtit +83
Maqola20105 iqtibos
ABI
iTAK: A Program for Genome-wide Prediction and Classification of Plant Transcription Factors, Transcriptional Regulators, and Protein Kinases
Yi Zheng, Jiao Chen, Honghe Sun +10
Boshqa20164 iqtibos
ABI
Genomic variation in 3,010 diverse accessions of Asian cultivated rice
Wensheng Wang, Ramil Mauleon, Zhiqiang Hu +68
Maqola20184 iqtibos
ABI
TCP genes: a family snapshot ten years later
Mar Martín‐Trillo, Pilar Cubas
Sharh maqola20093 iqtibos
ABI
ParaAT: A parallel tool for constructing multiple protein-coding DNA alignments
Zhang Zhang, Jingfa Xiao, Jiayan Wu +4
Maqola20123 iqtibos
ABI
PlantRegMap: charting functional regulatory maps in plants
Feng Tian, De-Chang Yang, Yu-Qi Meng +2
Maqola20193 iqtibos
ABI
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
Yang Liao, Gordon K. Smyth, Wei Shi
Maqola20133 iqtibos
ABI
TBtools-II: A “one for all, all for one” bioinformatics platform for biological big-data mining
Chengjie Chen, Ya Wu, Jiawei Li +8
Maqola20233 iqtibos
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KaKs_Calculator 2.0: A Toolkit Incorporating Gamma-Series Methods and Sliding Window Strategies
Dapeng Wang, Yubin Zhang, Zhang Zhang +2
Maqola20102 iqtibos
ABI
Repbase Update, a database of eukaryotic repetitive elements
Jerzy Jurka, Vladimir V. Kapitonov, Adam Pavlı́ček +3
Sharh maqola20052 iqtibos
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The conserved domain database in 2023
Jiyao Wang, Farideh Chitsaz, Myra K. Derbyshire +12
Maqola20222 iqtibos
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clusterProfiler 4.0: A universal enrichment tool for interpreting omics data
Tianzhi Wu, Erqiang Hu, Shuangbin Xu +11
Maqola20212 iqtibos
ABI
The<i>Arabidopsis thaliana</i>TCP transcription factors: A broadening horizon beyond development
Shutian Li
Sharh maqola20152 iqtibos
ABI
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
David Emms, Steven Kelly
Maqola20152 iqtibos
ABI
TCP14 and TCP15 affect internode length and leaf shape in Arabidopsis
Martin Kieffer, Vera Master, Richard Waites +1
Maqola20112 iqtibos
ABI
Analysis of the role of Arabidopsis class I TCP genes AtTCP7, AtTCP8, AtTCP22, and AtTCP23 in leaf development
José Antonio Aguilar-Martínez, Neelima Sinha
Maqola20132 iqtibos
ABI
The evolution of apical dominance in maize
John Doebley, Adrian O. Stec, Lauren Hubbard
Maqola19972 iqtibos
ABI
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Cole Trapnell, Brian A. Williams, Geo Pertea +6
Maqola20102 iqtibos
ABI
TCP factors: new kids on the signaling block
Michaël Nicolas, Pilar Cubas
Sharh maqola20162 iqtibos
ABI