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Clinical and Genetic Characterization of a Russian Family with Bardet–Biedl Syndrome Carrying a Previously Undescribed Missense Variant and a Recurrent Pathogenic Frameshift Variant in BBS7 Gene

Alexandra F. NikolaevaResearch Centre for Medical Genetics, Moskvorechye st., 1, Moscow 115522, RussiaTimur V. BoykoFaculty of Medical Biology, Department of Medical Biochemistry, Pirogov Russian National Research Medical University, Ostrovityanova st., 1, Moscow 117997, RussiaVitaly V. KadyshevResearch Centre for Medical Genetics, Moskvorechye st., 1, Moscow 115522, RussiaElena A. ShestopalovaMoscow Clinical Scientific Center named after A. S. Loginov, 1 Novogireevskaya st., bldg. 1, Moscow 111123, RussiaSvetlana V. KuznetsovaResearch Centre for Medical Genetics, Moskvorechye st., 1, Moscow 115522, RussiaElizabeth G. PanchenkoDepartment of General and Medical Genetics, Pirogov Russian National Research Medical University, Ostrovityanova st., 1, Moscow 117997, RussiaAnatoly N. TiulpakovResearch Centre for Medical Genetics, Moskvorechye st., 1, Moscow 115522, RussiaOxana P. RyzhkovaResearch Centre for Medical Genetics, Moskvorechye st., 1, Moscow 115522, RussiaTamara O. AripovaInstitute of Immunology and Human Genomics, Academy of Sciences of the Republic of Uzbekistan, 74 Yahyo Gulyamov Street, Tashkent 100060, UzbekistanTatyana HegayTashkent Research Centre for Medical Genetics, 74 Yahyo Gulyamov Street, Tashkent 100060, UzbekistanSergey I. KutsevResearch Centre for Medical Genetics, Moskvorechye st., 1, Moscow 115522, RussiaVladimir O. SiginResearch Centre for Medical Genetics, Moskvorechye st., 1, Moscow 115522, Russia
Genesjournal2026en
ABI

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Background/Objectives: Bardet–Biedl syndrome (BBS) is a rare autosomal recessive ciliopathy caused by variants in genes encoding components of the BBSome complex. Interpretation of rare variants in the BBS7 gene remains challenging, particularly for variants of uncertain significance. This study aimed to provide clinical and molecular genetic characterization of two siblings with a BBS phenotype harboring compound heterozygous variants in BBS7, including a previously undescribed missense variant. Methods: Two siblings (aged 11 and 8 years) presenting with obesity, postaxial polydactyly, retinal dystrophy, and cystic renal dysplasia were clinically evaluated. Whole-exome sequencing was performed in the proband, followed by segregation analysis within the family. Variant classification was conducted according to ACMG/AMP guidelines, integrating allele frequency data, in silico predictions, segregation evidence, and structural modeling. Results: Two heterozygous variants in the BBS7 gene (NM_176824.3) were identified in trans: a previously reported pathogenic frameshift variant, c.1967_1968delinsC, p.(Leu656ProfsTer18), and a missense variant, c.454T>C, p.(Cys152Arg), which, to the best of our knowledge, has not been previously reported in patients with Bardet–Biedl syndrome. The variant was extremely rare in population databases. Structural analysis suggested steric and electrostatic disruptions, including loss of a disulfide bond. Based on ACMG/AMP criteria, the variant was classified as likely pathogenic. Conclusions: This case supports the likely pathogenic classification of the c.454T>C, p.(Cys152Arg) variant. The findings highlight the importance of integrating clinical, genetic, and structural data for the interpretation of rare variants in BBS-associated genes.

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