Preprint

raxmlGUI 2.0: a graphical interface and toolkit for phylogenetic analyses using RAxML

Daniel EdlerGothenburg Global Biodiversity Centre, Box 461, SE-405 30 Gothenburg, SwedenJohannes KleinAlexandre AntonelliDepartment of Biological and Environmental Sciences, University of Gothenburg, Carl Skottsbergs gata 22B, Gothenburg 41319, SwedenDaniele SilvestroDepartment of Biological and Environmental Sciences, University of Gothenburg, Carl Skottsbergs gata 22B, Gothenburg 41319, Sweden

2019en

ABI

Annotatsiya

Abstract RaxmlGUI is a graphical user interface to RAxML, one of the most popular and widely used software for phylogenetic inference using maximum likelihood. Here we present raxmlGUI 2.0, a complete rewrite of the GUI which seamlessly integrates RAxML binaries for all major operating systems with an intuitive graphical front-end to set up and run phylogenetic analyses. Our program offers automated pipelines for analyses that require multiple successive calls of RAxML and built-in functions to concatenate alignment files while automatically specifying the appropriate partition settings. In addition to RAxML 8.x, raxmlGUI 2.0 also supports the new RAxML Next Generation. RaxmlGUI facilitates phylogenetic analyses by coupling an intuitive interface with the unmatched performance of RAxML.

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DOI: 10.1101/800912

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