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Ish: Transcriptome Analysis of Ten-DPA Fiber in an Upland Cotton (<i>Gossypium hirsutum</i>) Line with Improved Fiber Traits from Phytochrome A1 RNAi Plants

  1. Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

    Kenneth J. Livak, Thomas D. Schmittgen

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  2. Trimmomatic: a flexible trimmer for Illumina sequence data

    Anthony Bolger, Marc Lohse, Björn Usadel

    Maqola201423 iqtibos
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  3. KEGG: Kyoto Encyclopedia of Genes and Genomes

    Hiroyuki Ogata, Susumu Goto, Kazushige Sato +3

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  4. KEGG: Kyoto Encyclopedia of Genes and Genomes

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  5. RNA Interference for Functional Genomics and Improvement of Cotton (Gossypium sp.)

    Ibrokhim Y. Abdurakhmonov, Mirzakamol S. Ayubov, Khurshida A. Ubaydullaeva +19

    Sharh maqola201610 iqtibos
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  6. Phytochrome RNAi enhances major fibre quality and agronomic traits of the cotton Gossypium hirsutum L

    Ibrokhim Y. Abdurakhmonov, Zabardast T. Buriev, Sukumar Saha +3

    Maqola201410 iqtibos
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  7. Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement

    Tianzhen Zhang, Yan Hu, Wenkai Jiang +51

    Maqola20159 iqtibos
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  8. Development, genetic mapping and QTL association of cotton PHYA, PHYB, and HY5-specific CAPS and dCAPS markers

    Fakhriddin N. Kushanov, Alan E. Pepper, John Z. Yu +7

    MaqolaResearch in Cotton CultivationBMC Genetics20167 iqtibos
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  9. Gene Ontology: tool for the unification of biology

    Michael Ashburner, Catherine A. Ball, Judith A. Blake +17

    Maqola20007 iqtibos
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  10. Transcriptome Profiling, Molecular Biological, and Physiological Studies Reveal a Major Role for Ethylene in Cotton Fiber Cell Elongation

    Yong-Hui Shi, Shengwei Zhu, Xizeng Mao +7

    Maqola20066 iqtibos
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  11. Development of the Cotton Fiber

    Amarjit S. Basra, C. P. Malik

    Bob19845 iqtibos
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  12. Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles

    Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha +8

    Maqola20055 iqtibos
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  13. Cotton Fiber Length Is Affected by Far‐Red Light Impinging on Developing Bolls

    M. J. Kasperbauer

    Maqola20004 iqtibos
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  14. Molecular cloning and characterization of genomic sequence tags (GSTs) from the PHYA, PHYB, and HY5 gene families of cotton (Gossypium species)

    Ibrokhim Y. Abdurakhmonov

    Maqola20014 iqtibos
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  15. Identification of quantitative trait loci across interspecific F2, F2:3 and testcross populations for agronomic and fiber traits in tetraploid cotton

    Jiwen Yu, Shuxun Yu, Michael A. Gore +6

    Maqola20133 iqtibos
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  16. Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

    Ana Conesa, Stefan Götz, Juan Miguel García-Gómez +3

    Maqola20053 iqtibos
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  17. Polyploidy and small RNA regulation of cotton fiber development

    Xueying Guan, Qingxin Song, Z. Jeffrey Chen

    Sharh maqola20143 iqtibos
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  18. Gene Expression Changes and Early Events in Cotton Fibre Development

    J. J. Lee, Andrew W. Woodward, Z. J. Chen

    Sharh maqola20073 iqtibos
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  19. Transcriptome profiling of early developing cotton fiber by deep-sequencing reveals significantly differential expression of genes in a fuzzless/lintless mutant

    Qin Qin Wang, Fei Liu, Xu Sheng Chen +3

    Maqola20103 iqtibos
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  20. Mapping and quantifying mammalian transcriptomes by RNA-Seq

    A Mortazavi, Brian A. Williams, Kenneth McCue +2

    Maqola20083 iqtibos
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  21. Genome-wide identification and characterization of microRNAs differentially expressed in fibers in a cotton phytochrome A1 RNAi line

    Qing Miao, Peng Deng, Sukumar Saha +6

    MaqolaPlant Molecular Biology ResearchPLoS ONE20172 iqtibos
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  22. Molecular diversity of Egyptian cotton (Gossypium barbadense L.) and its relation to varietal development

    Kamal Fouad Abdellatif, Yehia A. Khidr, Y. M. El-Mansy +2

    Maqola20122 iqtibos
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  23. Overexpression of the phytochrome B gene from Arabidopsis thaliana increases plant growth and yield of cotton (Gossypium hirsutum)

    Abdul Qayyum Rao, Muhammad Irfan, Zafar Saleem +3

    Maqola20112 iqtibos
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  24. Statistical Methods for Research Workers

    Fisher, Ronald Aylmer

    Maqola19452 iqtibos
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  25. Association of Fiber Quality Parameters and Within‐Boll Yield Components in Upland Cotton

    C. Wayne Smith, Gwen G. Coyle

    Maqola19972 iqtibos
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