Работы, на которые ссылается эта работа

Работ: 91

Работа: Complete sequence and comparative analysis of the mitochondrial genome of the rare and endangered Clematis acerifolia, the first clematis mitogenome to provide new insights into the phylogenetic evolutionary status of the genus

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh, Daron M. Standley
Статья2013Цитирований: 70
ABI
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
Sudhir Kumar, Glen Stecher, Koichiro Tamura
Статья2016Цитирований: 42
ABI
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes
Jian‐Jun Jin, Wen-Bin Yu, Jun-Bo Yang +4
Статья2020Цитирований: 41
ABI
MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization
Kazutaka Katoh, John Rozewicki, Kazunori Yamada
Статья2017Цитирований: 29
ABI
REPuter: the manifold applications of repeat analysis on a genomic scale
Stefan Kurtz
Статья2001Цитирований: 27
ABI
Bandage: interactive visualization of <i>de novo</i> genome assemblies
Ryan R. Wick, Mark B. Schultz, Justin Zobel +1
Статья2015Цитирований: 25
ABI
PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies
Dong Zhang, Fangluan Gao, Ivan Jakovlić +4
Статья2019Цитирований: 25
ABI
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel
Статья2014Цитирований: 23
ABI
Fast and accurate short read alignment with Burrows–Wheeler transform
Heng Li, Richard Durbin
Статья2009Цитирований: 21
ABI
MISA-web: a web server for microsatellite prediction
Sebastian Beier, Thomas Thiel, Thomas A. Münch +2
Статья2017Цитирований: 17
ABI
MRBAYES: Bayesian inference of phylogenetic trees
John P. Huelsenbeck, Fredrik Ronquist
Статья2001Цитирований: 16
ABI
Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements
Aaron E. Darling, Bob Mau, Frederick R. Blattner +1
Статья2004Цитирований: 15
ABI
Tandem repeats finder: a program to analyze DNA sequences
Gary Benson
Статья1999Цитирований: 10
ABI
GeSeq – versatile and accurate annotation of organelle genomes
Michael Tillich, Pascal Lehwark, Tommaso Pellizzer +4
Статья2017Цитирований: 9
ABI
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
Yupeng Wang, Haibao Tang, Jeremy D. DeBarry +9
Статья2012Цитирований: 7
ABI
tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic Sequence
Todd M. Lowe, Sean R. Eddy
Статья1997Цитирований: 7
ABI
Chloroplast genomes: diversity, evolution, and applications in genetic engineering
Henry Daniell, Choun‐Sea Lin, Ming Yu +1
Обзорная статья2016Цитирований: 6
ABI
CPGAVAS2, an integrated plastome sequence annotator and analyzer
Linchun Shi, Haimei Chen, Mei Jiang +4
Статья2019Цитирований: 6
ABI
Interactive Tree Of Life (iTOL) v4: recent updates and new developments
Ivica Letunić, Peer Bork
Статья2019Цитирований: 4
ABI
Variable Tandem Repeats Accelerate Evolution of Coding and Regulatory Sequences
Rita Gemayel, Marcelo D. Vinces, Matthieu Legendre +1
Обзорная статья2010Цитирований: 3
ABI
Mitochondrial DNA of Vitis vinifera and the Issue of Rampant Horizontal Gene Transfer
Vadim Goremykin, Francesco Salamini, Riccardo Velasco +1
Статья2008Цитирований: 2
ABI
High speed BLASTN: an accelerated MegaBLAST search tool
Ying Chen, Weicai Ye, Yongdong Zhang +1
Статья2015Цитирований: 2
ABI
Angiosperm mitochondrial genomes and mutations
Tomohiko Kubo, Kathleen J. Newton
Обзорная статья2007Цитирований: 2
ABI
RCircos: an R package for Circos 2D track plots
Hongen Zhang, Paul S. Meltzer, Sean Davis
Статья2013Цитирований: 2
ABI
Apollo: a sequence annotation editor
SE Lewis, SMJ Searle, Nomi L. Harris +16
Обзорная статья2002Цитирований: 2
ABI