Работы, на которые ссылается эта работа

Работ: 117

Работа: Pangenome-wide characterization of the TCP gene family and its potential role in regulating adventitious shoot regeneration in apple

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen, Heiko A. Schmidt, Arndt von Haeseler +1
Статья2014Цитирований: 28
ABI
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutiérrez, José M. Silla-Martínez, Toni Gabaldón
Статья2009Цитирований: 26
ABI
The Sequence Alignment/Map format and SAMtools
Heng Li, Bob Handsaker, Alec Wysoker +7
Статья2009Цитирований: 22
ABI
MUSCLE: multiple sequence alignment with high accuracy and high throughput
R. C. Edgar
Статья2004Цитирований: 18
ABI
fastp: an ultra-fast all-in-one FASTQ preprocessor
Shifu Chen, Yanqing Zhou, Yaru Chen +1
Статья2018Цитирований: 18
ABI
HISAT: a fast spliced aligner with low memory requirements
Daehwan Kim, Ben Langmead, Steven L. Salzberg
Статья2015Цитирований: 7
ABI
The genome of the domesticated apple (Malus × domestica Borkh.)
Riccardo Velasco, Andrey Zharkikh, Jason P. Affourtit +83
Статья2010Цитирований: 5
ABI
iTAK: A Program for Genome-wide Prediction and Classification of Plant Transcription Factors, Transcriptional Regulators, and Protein Kinases
Yi Zheng, Jiao Chen, Honghe Sun +10
Другое2016Цитирований: 4
ABI
Genomic variation in 3,010 diverse accessions of Asian cultivated rice
Wensheng Wang, Ramil Mauleon, Zhiqiang Hu +68
Статья2018Цитирований: 4
ABI
TCP genes: a family snapshot ten years later
Mar Martín‐Trillo, Pilar Cubas
Обзорная статья2009Цитирований: 3
ABI
ParaAT: A parallel tool for constructing multiple protein-coding DNA alignments
Zhang Zhang, Jingfa Xiao, Jiayan Wu +4
Статья2012Цитирований: 3
ABI
PlantRegMap: charting functional regulatory maps in plants
Feng Tian, De-Chang Yang, Yu-Qi Meng +2
Статья2019Цитирований: 3
ABI
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
Yang Liao, Gordon K. Smyth, Wei Shi
Статья2013Цитирований: 3
ABI
TBtools-II: A “one for all, all for one” bioinformatics platform for biological big-data mining
Chengjie Chen, Ya Wu, Jiawei Li +8
Статья2023Цитирований: 3
ABI
KaKs_Calculator 2.0: A Toolkit Incorporating Gamma-Series Methods and Sliding Window Strategies
Dapeng Wang, Yubin Zhang, Zhang Zhang +2
Статья2010Цитирований: 2
ABI
Repbase Update, a database of eukaryotic repetitive elements
Jerzy Jurka, Vladimir V. Kapitonov, Adam Pavlı́ček +3
Обзорная статья2005Цитирований: 2
ABI
The conserved domain database in 2023
Jiyao Wang, Farideh Chitsaz, Myra K. Derbyshire +12
Статья2022Цитирований: 2
ABI
clusterProfiler 4.0: A universal enrichment tool for interpreting omics data
Tianzhi Wu, Erqiang Hu, Shuangbin Xu +11
Статья2021Цитирований: 2
ABI
The<i>Arabidopsis thaliana</i>TCP transcription factors: A broadening horizon beyond development
Shutian Li
Обзорная статья2015Цитирований: 2
ABI
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
David Emms, Steven Kelly
Статья2015Цитирований: 2
ABI
TCP14 and TCP15 affect internode length and leaf shape in Arabidopsis
Martin Kieffer, Vera Master, Richard Waites +1
Статья2011Цитирований: 2
ABI
Analysis of the role of Arabidopsis class I TCP genes AtTCP7, AtTCP8, AtTCP22, and AtTCP23 in leaf development
José Antonio Aguilar-Martínez, Neelima Sinha
Статья2013Цитирований: 2
ABI
The evolution of apical dominance in maize
John Doebley, Adrian O. Stec, Lauren Hubbard
Статья1997Цитирований: 2
ABI
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation
Cole Trapnell, Brian A. Williams, Geo Pertea +6
Статья2010Цитирований: 2
ABI
TCP factors: new kids on the signaling block
Michaël Nicolas, Pilar Cubas
Обзорная статья2016Цитирований: 2
ABI