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Иш: Complete sequence and comparative analysis of the mitochondrial genome of the rare and endangered Clematis acerifolia, the first clematis mitogenome to provide new insights into the phylogenetic evolutionary status of the genus

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh, Daron M. Standley
Мақола201370 иқтибос
ABI
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
Sudhir Kumar, Glen Stecher, Koichiro Tamura
Мақола201642 иқтибос
ABI
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes
Jian‐Jun Jin, Wen-Bin Yu, Jun-Bo Yang +4
Мақола202041 иқтибос
ABI
MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization
Kazutaka Katoh, John Rozewicki, Kazunori Yamada
Мақола201729 иқтибос
ABI
REPuter: the manifold applications of repeat analysis on a genomic scale
Stefan Kurtz
Мақола200127 иқтибос
ABI
Bandage: interactive visualization of <i>de novo</i> genome assemblies
Ryan R. Wick, Mark B. Schultz, Justin Zobel +1
Мақола201525 иқтибос
ABI
PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies
Dong Zhang, Fangluan Gao, Ivan Jakovlić +4
Мақола201925 иқтибос
ABI
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony Bolger, Marc Lohse, Björn Usadel
Мақола201423 иқтибос
ABI
Fast and accurate short read alignment with Burrows–Wheeler transform
Heng Li, Richard Durbin
Мақола200921 иқтибос
ABI
MISA-web: a web server for microsatellite prediction
Sebastian Beier, Thomas Thiel, Thomas A. Münch +2
Мақола201717 иқтибос
ABI
MRBAYES: Bayesian inference of phylogenetic trees
John P. Huelsenbeck, Fredrik Ronquist
Мақола200116 иқтибос
ABI
Mauve: Multiple Alignment of Conserved Genomic Sequence With Rearrangements
Aaron E. Darling, Bob Mau, Frederick R. Blattner +1
Мақола200415 иқтибос
ABI
Tandem repeats finder: a program to analyze DNA sequences
Gary Benson
Мақола199910 иқтибос
ABI
GeSeq – versatile and accurate annotation of organelle genomes
Michael Tillich, Pascal Lehwark, Tommaso Pellizzer +4
Мақола20179 иқтибос
ABI
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
Yupeng Wang, Haibao Tang, Jeremy D. DeBarry +9
Мақола20127 иқтибос
ABI
tRNAscan-SE: A Program for Improved Detection of Transfer RNA Genes in Genomic Sequence
Todd M. Lowe, Sean R. Eddy
Мақола19977 иқтибос
ABI
Chloroplast genomes: diversity, evolution, and applications in genetic engineering
Henry Daniell, Choun‐Sea Lin, Ming Yu +1
Шарҳ мақола20166 иқтибос
ABI
CPGAVAS2, an integrated plastome sequence annotator and analyzer
Linchun Shi, Haimei Chen, Mei Jiang +4
Мақола20196 иқтибос
ABI
Interactive Tree Of Life (iTOL) v4: recent updates and new developments
Ivica Letunić, Peer Bork
Мақола20194 иқтибос
ABI
Variable Tandem Repeats Accelerate Evolution of Coding and Regulatory Sequences
Rita Gemayel, Marcelo D. Vinces, Matthieu Legendre +1
Шарҳ мақола20103 иқтибос
ABI
Mitochondrial DNA of Vitis vinifera and the Issue of Rampant Horizontal Gene Transfer
Vadim Goremykin, Francesco Salamini, Riccardo Velasco +1
Мақола20082 иқтибос
ABI
High speed BLASTN: an accelerated MegaBLAST search tool
Ying Chen, Weicai Ye, Yongdong Zhang +1
Мақола20152 иқтибос
ABI
Angiosperm mitochondrial genomes and mutations
Tomohiko Kubo, Kathleen J. Newton
Шарҳ мақола20072 иқтибос
ABI
RCircos: an R package for Circos 2D track plots
Hongen Zhang, Paul S. Meltzer, Sean Davis
Мақола20132 иқтибос
ABI
Apollo: a sequence annotation editor
SE Lewis, SMJ Searle, Nomi L. Harris +16
Шарҳ мақола20022 иқтибос
ABI