Protein Structure and Dynamics

30 ta ish

1. Weakly Periodic Gibbs Measures for HC-Models on Cayley Trees

   Р. М. Хакимов

   MaqolaTheoretical and Computational PhysicsSiberian Mathematical Journal20188 iqtibos

   ABIABI:AkademIndex/2026.other.272185

2. Optimization of classical nonpolarizable force fields for OH− and H3O+

   Douwe Jan Bonthuis, Shavkat Mamatkulov, Roland R. Netz

   MaqolaOAOchiq kirishSpectroscopy and Quantum Chemical StudiesThe Journal of Chemical Physics20164 iqtibos

   ABIABI:AkademIndex/2016.article.000017

3. Bias-force guided simulations combined with experimental validations towards GPR17 modulators identification

   Sana Kari, Akshaya Murugesan, Ramesh Thiyagarajan +5

   MaqolaOAOchiq kirishReceptor Mechanisms and SignalingBiomedicine & Pharmacotherapy20233 iqtibos

   ABIABI:AkademIndex/2023.article.000638

4. MSA clustering enhances AF-Multimer’s ability to predict conformational landscapes of protein–protein interactions

   Khondamir R Rustamov, Artyom Y. Baev

   MaqolaOAOchiq kirishChemokine receptors and signalingBioinformatics Advances20242 iqtibos

   ABIABI:AkademIndex/2024.article.000975

5. Understanding Osaka mutation polymorphic Aβ fibril response to static and oscillating electric fields: insights from computational modeling

   Mukhriddin Makhkamov, Artyom Y. Baev, Erkin Kurganov +1

   MaqolaOAOchiq kirishAlzheimer's disease research and treatmentsScientific Reports20242 iqtibos

   ABIABI:AkademIndex/2024.article.001283

6. Decay τ− → φπ−ν τ and ω−φ mixing

   K. R. Nasriddinov, B. N. Kuranov, G.G. Takhtamyshev +1

   MaqolaMolecular spectroscopy and chiralityPhysics of Atomic Nuclei20011 iqtibos

   ABIABI:AkademIndex/2001.article.000192

7. SMILES‐based optimal descriptors: QSAR analysis of fullerene‐based HIV‐1 PR inhibitors by means of balance of correlations

   Andrey A. Toropov, Alla P. Toropova, Emilio Benfenati +2

   MaqolaComputational Drug Discovery MethodsJournal of Computational Chemistry20091 iqtibos

   ABIABI:AkademIndex/2009.article.000027

8. Термодинамика взаимодействующих систем молекул ДНК

   U. A. Rozikov

   MaqolaOAOchiq kirishSpectroscopy and Quantum Chemical StudiesТеоретическая и математическая физика20211 iqtibos

   ABIABI:AkademIndex/2021.article.002593

9. Prediction of the structure of a silk-like protein in oligomeric states using explicit and implicit solvent models

   Jamoliddin Razzokov, Saber Naderi, Paul van der Schoot

   MaqolaProtein Structure and DynamicsSoft Matter20141 iqtibos

   ABIABI:AkademIndex/2026.other.207002

10. Disruption of conserved polar interactions causes a sequential release of Bim mutants from the canonical binding groove of Mcl1

    Parthiban Marimuthu, Jamoliddin Razzokov, G. Eshonqulov

    MaqolaOAOchiq kirishCell death mechanisms and regulationInternational Journal of Biological Macromolecules20201 iqtibos

    ABIABI:AkademIndex/2026.other.240708

11. Atom‐Based 2D Quadratic Indices in Drug Discovery of Novel Tyrosinase Inhibitors: Results of <i>In Silico</i> Studies Supported by Experimental Results

    Yovani Marrero Ponce, Mahmud Tareq Hassan Khan, Gerardo M. Casañola‐Martín +5

    MaqolaComputational Drug Discovery MethodsQSAR & Combinatorial Science20061 iqtibos

    ABIABI:AkademIndex/2026.other.352428

12. Thermodynamical studies of oxygen equilibrium of hemoglobin. Nonuniform heats and entropy changes for the individual oxygenation steps and enthalpy-entropy compensation.

    Katsunori Imai, Takashi Yonetani

    MaqolaOAOchiq kirishHemoglobin structure and functionJournal of Biological Chemistry19750 iqtibos

    ABIABI:AkademIndex/1975.article.000002

13. Low-temperature heat capacity and dynamic properties of DNA as a quasi-one-dimensional system

    B. I. Verkin, V. Ya. Sukharevski, Yu. V. Telezhenko +2

    MaqolaDNA and Nucleic Acid ChemistrySoviet Journal of Low Temperature Physics19770 iqtibos

    ABIABI:AkademIndex/1977.article.000054

14. Structural and functional consequences of amino acid substitutions in hemoglobin as manifested in natural and artificial mutants.

    Katsunori Imai, Shih Dt, Jeremy R. H. Tame +2

    MaqolaHemoglobin structure and functionPubMed19890 iqtibos

    ABIABI:AkademIndex/1989.article.000068

15. Tryptophanase from Escherichia coli: catalytic and spectral properties in water-organic solvents.

    N. G. Faleev, I. Dementieva, Lyudmila N. Zakomirdina +2

    MaqolaProtein Structure and DynamicsPubMed19940 iqtibos

    ABIABI:AkademIndex/1994.article.000065

16. Conformational stability of bovine holo and apo adrenodoxin — A scanning calorimetric study

    Tatjana V. Burova, Rita Bernhardt, Wolfgang Pfeil

    MaqolaOAOchiq kirishSpectroscopy and Quantum Chemical StudiesProtein Science19950 iqtibos

    ABIABI:AkademIndex/1995.article.000075

17. Qspr Modeling Organic Compounds Gibb's Free Energy by Weighting of Nearest Neighboring Codes

    Eduardo A. Castro, Alla P. Toropova, Andrey A. Toropov +1

    MaqolaOAOchiq kirishComputational Drug Discovery MethodsSSRN Electronic Journal20030 iqtibos

    ABIABI:AkademIndex/2003.article.000404

18. Prediction of Tyrosinase Inhibition Activity Using Atom‐Based Bilinear Indices

    Yovani Marrero‐Ponce, Mahmud Tareq Hassan Khan, Gerardo M. Casañola‐Martín +4

    MaqolaComputational Drug Discovery MethodsChemMedChem20070 iqtibos

    ABIABI:AkademIndex/2007.article.000037

19. InChI-based optimal descriptors: QSAR analysis of fullerene[C60]-based HIV-1 PR inhibitors by correlation balance

    Andrey A. Toropov, Alla P. Toropova, Emilio Benfenati +2

    MaqolaComputational Drug Discovery MethodsEuropean Journal of Medicinal Chemistry20100 iqtibos

    ABIABI:AkademIndex/2010.article.000064

20. Non-poissonian Distribution of Point Mutations in DNA

    N. N. Turaeva, Б. Л. Оксенгендлер

    MaqolaOAOchiq kirishProtein Structure and DynamicsFrontiers in Chemistry20200 iqtibos

    ABIABI:AkademIndex/2020.article.000587

21. Direct Observation of Anisotropy-Driven Formation of Amyloid Spherulites in Real-time by Super-resolution Microscopy

    Min Zhang, Henrik Dahl Pinholt, Xin Zhou +5

    PreprintOAOchiq kirishAdvanced Fluorescence Microscopy TechniquesResearch Square20210 iqtibos

    ABIABI:AkademIndex/2021.preprint.000172

22. Direct Observation of Heterogeneous Formation of Amyloid Spherulites in Real-time by Super-resolution Microscopy

    Nikos S. Hatzakis, Min Zhang, Henrik Dahl Pinholt +5

    PreprintAdvanced NMR Techniques and ApplicationsResearch Square20220 iqtibos

    ABIABI:AkademIndex/2022.preprint.000030

23. Tidying up the conformational ensemble of a disordered peptide by computational prediction of spectroscopic fingerprints

    Monika Michaelis, Lorenzo Cupellini, Carl Mensch +3

    PreprintMolecular spectroscopy and chiralityChemRxiv20220 iqtibos

    ABIABI:AkademIndex/2022.preprint.000083

24. On the Automatic Optimization of Lipid Models in the Martini Force Field using SwarmCG

    Charly Empereur‐mot, Kasper B. Pedersen, Riccardo Capelli +6

    PreprintLipid Membrane Structure and BehaviorChemRxiv20230 iqtibos

    ABIABI:AkademIndex/2023.preprint.000013

25. On the Automatic Optimization of Lipid Models in the Martini Force Field using SwarmCG

    Charly Empereur‐mot, Kasper B. Pedersen, Cristina Caruso +5

    PreprintLipid Membrane Structure and BehaviorChemRxiv20230 iqtibos

    ABIABI:AkademIndex/2023.preprint.000101