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Function-Based Rhizosphere Assembly along a Gradient of Desiccation in the Former Aral Sea

Wisnu Adi WicaksonoInstitute of Environmental Biotechnology, Graz University of Technology, Graz, AustriaDilfuza EgamberdievaNational University of Uzbekistan, Faculty of Biology, Tashkent, UzbekistanChristian BergUniversity of Graz, Institute of Biology, Graz, AustriaMaximilian MoraInstitute of Environmental Biotechnology, Graz University of Technology, Graz, AustriaPeter KusstatscherInstitute of Environmental Biotechnology, Graz University of Technology, Graz, AustriaTomislav CernavaInstitute of Environmental Biotechnology, Graz University of Technology, Graz, AustriaGabriele BergInstitute for Biochemistry and Biology, University of Potsdam, Potsdam, Germany
mSystemsjournal2022en
ABI

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The desertification of the Aral Sea basin in Uzbekistan and Kazakhstan represents one of the most serious anthropogenic environmental disasters of the last century. Since the 1960s, the world's fourth-largest inland body of water has been constantly shrinking, which has resulted in an extreme increase of salinity accompanied by accumulation of many hazardous and carcinogenic substances, as well as heavy metals, in the dried-out basin. Here, we investigated bacterial and archaeal communities in the rhizosphere of pioneer plants by combining classic molecular methods with amplicon sequencing as well as metagenomics for functional insights. By implementing a desiccation gradient, we observed (i) remarkable differences in the archaeon-bacterium ratio of plant rhizosphere samples, (ii) replacement of archaeal indicator taxa during succession, and (iii) the presence of specific, potentially plant-beneficial biosynthetic pathways in archaea present during the early stages. In addition, our results provide hitherto-undescribed insights into the functional redundancy between plant-associated archaea and bacteria.

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